Sun 10 Jun 2012 02:51:26 PM UTC, comment #13:
Confirmed.
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Sun 10 Jun 2012 11:02:55 AM UTC, comment #12:
This file is correctly displayed again.
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Sun 03 Jun 2012 02:06:14 PM UTC, comment #11:
I see. I guess this is fixed then.
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Sun 03 Jun 2012 02:02:53 PM UTC, comment #10:
The pdb file is not displayed because it actually describe a crystal. I need to fix that. In the future, it will propose to open the file in gcrystal instead, but I didn't implement it for 0.14. The mol file should be displayed.
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Sun 03 Jun 2012 01:47:31 PM UTC, comment #9:
You were right, I guess mixing rpm and self-built code is a bad idea.
Anyhow, it does not crash anymore, but nothing is shown either. Is that expected?
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Sun 03 Jun 2012 01:43:52 PM UTC, comment #8:
I removed the g_free code, you need to reinstall the cml plugin.
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Sun 03 Jun 2012 01:35:48 PM UTC, comment #7:
I am not sure where did the backtrace go. Here it is.
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Sun 03 Jun 2012 01:34:13 PM UTC, comment #6:
PDB still crashes here, mol contintues to work from the homedir:
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Sun 03 Jun 2012 01:15:43 PM UTC, comment #5:
This one does not crash for me, but the original one doesn't either now that I removed the g_free. I just commited this fix, can you try again after updating?
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Sun 03 Jun 2012 01:11:37 PM UTC, comment #4:
Actually the error in comment #3 seems to be caused by either spaces or the unusually long filename - moving the file to the home folder allows gchem3d to open it properly.
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Sun 03 Jun 2012 12:57:32 PM UTC, comment #3:
Attempting to open a .mol file also results in a crash:
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Sun 03 Jun 2012 12:42:04 PM UTC, comment #2:
Hmm, looks like when babel converts the pdb to cml, it uses XFract and others since the file actually describes a crystal. This looks like a severe regression.
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Sun 03 Jun 2012 12:27:00 PM UTC, comment #1:
Thanks for reporting. This g_free call is just stupid and, worse, seems to be somewhat ancient. Now I'm facing another issue: I don't see any thin in the view.
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Sun 03 Jun 2012 10:21:02 AM UTC, original submission:
Since I upgraded to Fedora 17 I could finally test gchemutils-0.13. Unfortunately, gchem3d seems to crash when opening lysozyme:
I have also tested SVN trunk built without any RPM magic to eliminate the possibility of the latter interfering.
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