taskReproducible paper template - Tasks: task #15399, Configure option for software...

 
 

You are not allowed to post comments on this tracker with your current authentication level.

task #15399: Configure option for software download from Zenodo

Submitted by:  Mohammad Akhlaghi <makhlaghi>
Submitted on:  Fri 27 Sep 2019 03:59:02 PM UTC  
 
Should Start On:  Thu 26 Sep 2019 11:00:00 PM UTC Should be Finished on:  Thu 26 Sep 2019 11:00:00 PM UTC
Category:  Software Priority:  5 - Normal
Status:  Postponed Privacy:  Public
Percent Complete:  0% Assigned to:  None
Open/Closed:  Open Effort:  0.00

Fri 27 Sep 2019 03:59:02 PM UTC, original submission:  

In line with task #15345 (Automatically using backup tarball repository) and task #15359 (Selecting backup tarball repositories), it would also be good to download the general software package from Zenodo when the author as provided one.

When publishing a project, authors may also upload all their software to a server like Zenodo, for example `software-v4-0-g8505cfd.tar.gz' in zenodo.3408481.

Fortunately Zenodo can associate the DOI link before the publication. So, to make it easier/automatic for the reader of a project's paper, we can add an configure-time option to automatically download the Zenodo (or any other server) tarball of tarballs, with a command like this:

./project configure --use-tarball-package

When this option is given, the script won't ask for the "software tarball directory" any more. After the basic checks, it will download the packaged tarball (with known address defined by the author), unpack it, and define the unpacked directory as the `DEPENDENCIES-DIR' (directory that the users give for "software tarball directory").

In this way, we only need some small changes at the start and everything else will remain as before.

Mohammad Akhlaghi <makhlaghi>
Project Administrator

 

No files currently attached

 

Depends on the following items: None found

Items that depend on this one: None found

 

Carbon-Copy List
  • -email is unavailable- added by makhlaghi (Submitted the item)
  •  

    Do you think this task is very important?
    If so, you can add your encouragement to it.
    This task has 0 encouragements so far.

    Only logged-in users can vote.

     

     

     

    No changes have been made to this item

    Back to the top


    Powered by Savane 3.5